PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11880.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 264aa    MW: 28980.8 Da    PI: 5.7471
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.32e-191571148
                     TSSS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++++G g           W++Ia +++ gRt++++k++w+++l
       PIN11880.1 15 KGPWTPEEDDKLIKYIQKHGHGswralpklagMWSAIATHLP-GRTDNEIKNFWNTHL 71
                     79****************************************.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGRSPCCDEG TGLKKGPWTP EEDDKLIKYI QKHGHGSWRA LPKLAGMWSA IATHLPGRTD  60
NEIKNFWNTH LKKKLIQMGF DPMTHQPRTD IFSSLPNLIA LAKLIELNPS IWEDQAMRLQ  120
AEAAQMARLN HYCFQSLLQP PLLNNTSVNN MATFNLLNSL KDTSILSHLE SPAPPSTAAG  180
FLPEAVAFSH MPDLQAPCGG DQSKVGGLDN HEGCSSGWLQ QDLSPEQPQT AAPVTESGIS  240
TSSYGGSAQM WSELLDDPIF HEII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.15e-57MYB family protein