PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11571.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 520aa MW: 59101.8 Da PI: 6.1701

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.6	1.9e-29	48	131	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++e+laL+++r+em+ ++r++ lk+plW+evs+k++e g++rs+k+Ckek+en+ k++k++k+g+++r ++ +++++f+qle PIN11571.1 48 RWPREETLALLKIRSEMDLAFRDSTLKAPLWDEVSRKLSELGYNRSAKKCKEKFENIYKYHKRTKDGRSSR--QNGKNYRFFEQLE 131 8*******************************************************************8..55567****97 PP
2	trihelix	99.5	2.8e-31	350	434	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k e+ aLi ++++++ +++++ k+plWee+s+ m++ g+ rs+k+Ckekwen+nk+yk++ke++kkr +e+s+tcpyf+ le PIN11571.1 350 RWPKAEIEALIMLKTDLDLKYQDSGPKGPLWEEISSGMKKLGYDRSAKRCKEKWENINKYYKRVKESNKKR-PEDSKTCPYFNMLE 434 8*******************************************************************8.99*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MMDSSVFLEN SGGGADGGSG SDGVGVDLRN DGGSGGGEES DRNSAGNRWP REETLALLKI 60 RSEMDLAFRD STLKAPLWDE VSRKLSELGY NRSAKKCKEK FENIYKYHKR TKDGRSSRQN 120 GKNYRFFEQL ELFDSQFSVP STPTNQIPSY APIATSNPAT TVVTKPISCS QDFTIPSSNQ 180 DRSGEFMSAS TSTASSSKES EGSIKKKRKL EDYFERLMKD VLEKQEDLQN KLLEAIEKCE 240 KDRIAREEEW KMQEMARIKR EQELLAKERE ITAAKDAALL AFLQKMTQQT TPLQIPEILT 300 PLFEKLSDKR ENVLEKHAYV QENGVGETST HIEKQDNSGG ENTIQTSSSR WPKAEIEALI 360 MLKTDLDLKY QDSGPKGPLW EEISSGMKKL GYDRSAKRCK EKWENINKYY KRVKESNKKR 420 PEDSKTCPYF NMLESLYAKR SKKSENVGRN LKPEQILMQM MGQHQQQQQQ QKQQQQQSTG 480 EYGEKDQQSQ EDDVENEHND DSGDGYQVVA NNLSSVKTLG

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MMDSSVFLEN SGGGADGGSG SDGVGVDLRN DGGSGGGEES DRNSAGNRWP REETLALLKI  60
RSEMDLAFRD STLKAPLWDE VSRKLSELGY NRSAKKCKEK FENIYKYHKR TKDGRSSRQN  120
GKNYRFFEQL ELFDSQFSVP STPTNQIPSY APIATSNPAT TVVTKPISCS QDFTIPSSNQ  180
DRSGEFMSAS TSTASSSKES EGSIKKKRKL EDYFERLMKD VLEKQEDLQN KLLEAIEKCE  240
KDRIAREEEW KMQEMARIKR EQELLAKERE ITAAKDAALL AFLQKMTQQT TPLQIPEILT  300
PLFEKLSDKR ENVLEKHAYV QENGVGETST HIEKQDNSGG ENTIQTSSSR WPKAEIEALI  360
MLKTDLDLKY QDSGPKGPLW EEISSGMKKL GYDRSAKRCK EKWENINKYY KRVKESNKKR  420
PEDSKTCPYF NMLESLYAKR SKKSENVGRN LKPEQILMQM MGQHQQQQQQ QKQQQQQSTG  480
EYGEKDQQSQ EDDVENEHND DSGDGYQVVA NNLSSVKTLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-127	Trihelix family protein