PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11542.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 236aa    MW: 26074.9 Da    PI: 6.168
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002586108123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PIN11542.1  86 FSCNYCRRKFYSSQALGGHQNAH 108
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MMPPNYNNIE SEDESEVASN ISIQEISQES KNTSSCLEDY PLSHHQETVP VTLDLTLGIK  60
GCDSELKGSG EPASTVSNHP PTSRVFSCNY CRRKFYSSQA LGGHQNAHKR ERTLAKRAMR  120
MGMFSDRYAS LASLPLHGSA FRSLGIEAHS SMHQQVLQNS ERPLHGIRNS GARFVDQGYF  180
GLPMYVEYDE AELSWPGSFR QIEGLQGNPD SGQGSHINFV TTAPPDSSLP DLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-47C2H2 family protein