PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11530.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 496aa MW: 56939.5 Da PI: 8.7046

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.7	7.7e-08	12	45	56	89
FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHel 89 a+++ gC aklk++++k++ w+v+ ++++HnH++ PIN11530.1 12 ASSKYGCSAKLKISRSKEEPWRVAIFDNKHNHDV 45 57899***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MQPDSNECTF PASSKYGCSA KLKISRSKEE PWRVAIFDNK HNHDVYAPNE AYLLRSQRNM 60 TKEHRMLFNT ICNSGVPPAR AFGLMQNLAG EEQNLGVTQS EAFKVESDIT LINIFFRDSQ 120 WFADYESFED VLSFDITYKT NKYRLIYAPF CQAMINAIRT VFPATHHRLC EWHINQNGPS 180 HFGSLNTNSG FKHVWTKCMS YCDHVEEFEA TWQLMVETYN TGEQKCCGLM ATSRSEGTNT 240 ALKKAIRNAT SFLLDCVHGY EKPALLARHN PLLKHTTKVY KHNIFHLFQN EFKDFFNFEC 300 MEEPTYPIFS LRRFTIISFG KSTQTRVVEM TTILQKVYTQ VNLKNIPNRY RLQTWTKNAK 360 NKVHTEASEN GSGRNDSVNM SEMAFVSHAT KKIHDLAMRC TPYEEARYIS IESINNANDK 420 INAFMLNMSL NDSNICSGNT NNKGNDNVGI EMPVRDPPIV RSRGITSLHK CHWEDKSKTG 480 KGKTSYQTTK GLRQIG

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MQPDSNECTF PASSKYGCSA KLKISRSKEE PWRVAIFDNK HNHDVYAPNE AYLLRSQRNM  60
TKEHRMLFNT ICNSGVPPAR AFGLMQNLAG EEQNLGVTQS EAFKVESDIT LINIFFRDSQ  120
WFADYESFED VLSFDITYKT NKYRLIYAPF CQAMINAIRT VFPATHHRLC EWHINQNGPS  180
HFGSLNTNSG FKHVWTKCMS YCDHVEEFEA TWQLMVETYN TGEQKCCGLM ATSRSEGTNT  240
ALKKAIRNAT SFLLDCVHGY EKPALLARHN PLLKHTTKVY KHNIFHLFQN EFKDFFNFEC  300
MEEPTYPIFS LRRFTIISFG KSTQTRVVEM TTILQKVYTQ VNLKNIPNRY RLQTWTKNAK  360
NKVHTEASEN GSGRNDSVNM SEMAFVSHAT KKIHDLAMRC TPYEEARYIS IESINNANDK  420
INAFMLNMSL NDSNICSGNT NNKGNDNVGI EMPVRDPPIV RSRGITSLHK CHWEDKSKTG  480
KGKTSYQTTK GLRQIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-27	FAR1 family protein