PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11506.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CAMTA

Protein Properties

Length: 943aa MW: 106074 Da PI: 6.3096

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	167.5	2.1e-52	13	126	4	116
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e + rwlk+ e+ iL+n+e+h+lt++ +++p+sgsl L+n++++++frkDG+ w+++kd +t+ E+he+LKvg+ve+l+cyYah+eenp+fqrr+yw+ PIN11506.1 13 EaQIRWLKPVEVFFILQNYEEHQLTHQIPQKPTSGSLYLFNKRVLKFFRKDGHRWRRRKDQRTIAEAHERLKVGNVEALNCYYAHGEENPNFQRRSYWM 111 5588********************************************************************************************* PP CG-1 102 Leeelekivlvhyle 116 L+ ++e+ivlvhy++ PIN11506.1 112 LDPAYEHIVLVHYRD 126 ***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MQSGYDINHL AREAQIRWLK PVEVFFILQN YEEHQLTHQI PQKPTSGSLY LFNKRVLKFF 60 RKDGHRWRRR KDQRTIAEAH ERLKVGNVEA LNCYYAHGEE NPNFQRRSYW MLDPAYEHIV 120 LVHYRDIGEG RQNAGSTSQF STLSSSTFSP SPNSFATHQP DSSFVIGESN ELYHNHSSPS 180 SVEISSSQVM ESHGMNQLAI KGRTDEVSSS SIPDLSQALR RIEQQLSLND DEVKDISTFY 240 IENEQSNDLE GMLRDYELSG QTPNRSDNLL SQQSDDGVRQ HHQLTGVEVD IWKEMLDNSK 300 NLPSVESQAH FGGQDDSSLI LQEVDSLKYS AYSPVPHTYG TTADCYSSLF DQDGLEISHE 360 NNISLTIAPT QKFTIREISP EWCYTCEGGK IIIIGSFLSD PSECVWACMI GDTEVPVQII 420 QEGVFCCHAP PHLHGKVNIC ITSGNRQSCS EIREFEYRAK PNICMHSSPS ETEANKSSEE 480 LLLLVRFVQM LLSDMLPKGD VFESRIDLLG KSRIAEDSWS HIIDALLDGT STSSSTLDWL 540 LQELLKDRLE MWLSSKLRNN NNKGCCLSKK EQGIIHMIAG LGFEWALQPI LNSGVSINFR 600 DINGWTALHW AARFGREKMV AALIASGASA GAVTDPNSQD PIGKTPASIA ANCGHRGLAG 660 YLSEVALTSH LSSLTLEESE LSKGSAAVEA ERTVNSLSKE SSSTNEDQDS LKHTLAAVRN 720 AAQAAARIQS AFRAHSFRKR QQRETTFAVA GDKGDEFSIL ANDIQGLSAA SKLAFRNARD 780 FNSAALSIQK KYRGWKGRRD FLALRQKVVK IQAHVRGYQV RKNYKVCWAV GILEKLILRW 840 RRRGVGLRGF RQESEPIDES EDEDILKVFR KQKVDATIDE AVSRVLSMVE SPKARQQYHR 900 ILEKYRQAKA ELETVESDTA SSAQDISYSH MENDENDEIH QLK

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MQSGYDINHL AREAQIRWLK PVEVFFILQN YEEHQLTHQI PQKPTSGSLY LFNKRVLKFF  60
RKDGHRWRRR KDQRTIAEAH ERLKVGNVEA LNCYYAHGEE NPNFQRRSYW MLDPAYEHIV  120
LVHYRDIGEG RQNAGSTSQF STLSSSTFSP SPNSFATHQP DSSFVIGESN ELYHNHSSPS  180
SVEISSSQVM ESHGMNQLAI KGRTDEVSSS SIPDLSQALR RIEQQLSLND DEVKDISTFY  240
IENEQSNDLE GMLRDYELSG QTPNRSDNLL SQQSDDGVRQ HHQLTGVEVD IWKEMLDNSK  300
NLPSVESQAH FGGQDDSSLI LQEVDSLKYS AYSPVPHTYG TTADCYSSLF DQDGLEISHE  360
NNISLTIAPT QKFTIREISP EWCYTCEGGK IIIIGSFLSD PSECVWACMI GDTEVPVQII  420
QEGVFCCHAP PHLHGKVNIC ITSGNRQSCS EIREFEYRAK PNICMHSSPS ETEANKSSEE  480
LLLLVRFVQM LLSDMLPKGD VFESRIDLLG KSRIAEDSWS HIIDALLDGT STSSSTLDWL  540
LQELLKDRLE MWLSSKLRNN NNKGCCLSKK EQGIIHMIAG LGFEWALQPI LNSGVSINFR  600
DINGWTALHW AARFGREKMV AALIASGASA GAVTDPNSQD PIGKTPASIA ANCGHRGLAG  660
YLSEVALTSH LSSLTLEESE LSKGSAAVEA ERTVNSLSKE SSSTNEDQDS LKHTLAAVRN  720
AAQAAARIQS AFRAHSFRKR QQRETTFAVA GDKGDEFSIL ANDIQGLSAA SKLAFRNARD  780
FNSAALSIQK KYRGWKGRRD FLALRQKVVK IQAHVRGYQV RKNYKVCWAV GILEKLILRW  840
RRRGVGLRGF RQESEPIDES EDEDILKVFR KQKVDATIDE AVSRVLSMVE SPKARQQYHR  900
ILEKYRQAKA ELETVESDTA SSAQDISYSH MENDENDEIH QLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein