PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 25960.3 Da PI: 8.9333 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.4e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp +e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++s+ +++ PIN11300.1 14 LPPGFRFHPTDEELVVQYLKRKVLSCPLPA-SIIPEVDVCKSDPWDLP---GDSEQERYFFSTREVKYPNGNRSNRATGSGYWKATGLDKQIVSSrSNQ 108 79****************************.89***************...3467899***********************************985667 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy+g+ pkg +tdWvmheyrl PIN11300.1 109 IVGMKKTLVFYRGKPPKGCRTDWVMHEYRL 138 7***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEKLSLAKNG VLRLPPGFRF HPTDEELVVQ YLKRKVLSCP LPASIIPEVD VCKSDPWDLP 60 GDSEQERYFF STREVKYPNG NRSNRATGSG YWKATGLDKQ IVSSRSNQIV GMKKTLVFYR 120 GKPPKGCRTD WVMHEYRLIT AKNLPQENWV LCRIFFKRRN NKIDDHEGAV IQNRSGEPGS 180 VPVFYDFMAK ERADLNLLPA NSSSGSSGIT EISNRKDSDD HEESSSCNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-102 | NAC family protein |