PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11162.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 453aa MW: 49849.3 Da PI: 6.8548

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.3	1.3e-31	230	285	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ PIN11162.1 230 KARRCWSPDLHRRFVTALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 285 68****************************************************97 PP
2	Myb_DNA-binding	38.6	2.4e-12	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v a ++lGg t+k I + m g+t ++ks++qky+ PIN11162.1 232 RRCWSPDLHRRFVTALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 283 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MMTSSSELSF DCKPHLYTML LKSFGDQTSS EQTLKLEEFL ARLEEERLKI DAFKRELPLC 60 MQLLTNAMEA SRQQLQSQRR NQEAKPVLEE FIPLKNTNSS NDENEEINNV SSDKANWMTS 120 AQLWNQENEG TKAQQSPLMT SPQEADIKLA LNAKQRINGG GAFHPFSSKD RESFPELALA 180 SSHKEEMEDK KSSSDTNSRR ENSGKCGGDS VAAEKEQVSG TANTTQTHRK ARRCWSPDLH 240 RRFVTALQML GGSQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQATVTAA 300 PQVVVLGGIW VPPEYAAAAA HGGAPLYGAH PAAAAAATHH VSPPFCSPTP QEMYPAIAPP 360 PPPPNHQMHH HAIHHHHHHQ QVHMYNRPPL TQRNSSPESD VHGGAGDPSE SIEDGKSESG 420 SWKADSGGGG ENGGERRRVE GEESNASVVS LKF

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MMTSSSELSF DCKPHLYTML LKSFGDQTSS EQTLKLEEFL ARLEEERLKI DAFKRELPLC  60
MQLLTNAMEA SRQQLQSQRR NQEAKPVLEE FIPLKNTNSS NDENEEINNV SSDKANWMTS  120
AQLWNQENEG TKAQQSPLMT SPQEADIKLA LNAKQRINGG GAFHPFSSKD RESFPELALA  180
SSHKEEMEDK KSSSDTNSRR ENSGKCGGDS VAAEKEQVSG TANTTQTHRK ARRCWSPDLH  240
RRFVTALQML GGSQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQATVTAA  300
PQVVVLGGIW VPPEYAAAAA HGGAPLYGAH PAAAAAATHH VSPPFCSPTP QEMYPAIAPP  360
PPPPNHQMHH HAIHHHHHHQ QVHMYNRPPL TQRNSSPESD VHGGAGDPSE SIEDGKSESG  420
SWKADSGGGG ENGGERRRVE GEESNASVVS LKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-83	G2-like family protein