PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11150.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 442aa MW: 49186.1 Da PI: 5.272

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.8	5.8e-34	242	296	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe Fveave+LGGse+AtPk +l+lm+vkgLt++hvkSHLQkYR+ PIN11150.1 242 KARMRWTPELHETFVEAVEKLGGSERATPKGVLKLMNVKGLTIYHVKSHLQKYRT 296 68****************************************************8 PP
2	Myb_DNA-binding	59.7	6.4e-19	244	295	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ kg+t +++ks++qky+ PIN11150.1 244 RMRWTPELHETFVEAVEKLGGSeraTPKGVLKLMNvKGLTIYHVKSHLQKYR 295 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MTPALFKKKA SETISNDEEA SGSSSGLSRI LPTPSEEKFP KLPDSPQVTL SQELSTNLIS 60 SSNNKTVGHL FSSASDYPSN LRHSMSFDSS RPKALPFISK QLKDGATFAS SQLSPSVIRA 120 RQLDCCDVEN NDVSWNTDAS NNFLDVPLNA PVDDSQVETC TKKTDWRDWA DQLITVDDDM 180 CGSNLSDLLV DVNVPDLDAK LLELPSDISV CHTQINQHHH IPTSRGQSCP LVTSPCASPV 240 AKARMRWTPE LHETFVEAVE KLGGSERATP KGVLKLMNVK GLTIYHVKSH LQKYRTARHK 300 PESSEGTPEK KLKNVAERTS LDLKTMMGIT EALRLQMEVQ KQLHDQLEIQ RNLQLRIEEQ 360 GKHLQTMFEK QRKMEEEKLK ASSSNIDEPS QLSTIEKDTK EDEDTDTNEI STETKTSEDK 420 EPDADACSPP AKRAKADEMV KS

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MTPALFKKKA SETISNDEEA SGSSSGLSRI LPTPSEEKFP KLPDSPQVTL SQELSTNLIS  60
SSNNKTVGHL FSSASDYPSN LRHSMSFDSS RPKALPFISK QLKDGATFAS SQLSPSVIRA  120
RQLDCCDVEN NDVSWNTDAS NNFLDVPLNA PVDDSQVETC TKKTDWRDWA DQLITVDDDM  180
CGSNLSDLLV DVNVPDLDAK LLELPSDISV CHTQINQHHH IPTSRGQSCP LVTSPCASPV  240
AKARMRWTPE LHETFVEAVE KLGGSERATP KGVLKLMNVK GLTIYHVKSH LQKYRTARHK  300
PESSEGTPEK KLKNVAERTS LDLKTMMGIT EALRLQMEVQ KQLHDQLEIQ RNLQLRIEEQ  360
GKHLQTMFEK QRKMEEEKLK ASSSNIDEPS QLSTIEKDTK EDEDTDTNEI STETKTSEDK  420
EPDADACSPP AKRAKADEMV KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	6e-79	G2-like family protein