PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 231aa MW: 26967.4 Da PI: 8.3753 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62 | 9.3e-20 | 66 | 118 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++++eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k PIN11128.1 66 KKRLSNEQLELLENSFQEEIKLDPDRKIKLAKELGLQPRQIAVWFQNRRARWK 118 5569************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.8 | 6.8e-39 | 65 | 155 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rls+eq++lLE+sF+ee kL+p+rK +la+eLglqprq+avWFqnrRAR+k+kqlE+ y+aLk+++da+++++++L++ev +Lr+ lk PIN11128.1 65 KKKRLSNEQLELLENSFQEEIKLDPDRKIKLAKELGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEFDAVSRDKQKLQQEVLALRAILK 155 9**************************************************************************************8876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDWNGNVRVP FFFRPENAFS FLYNYNYDQF PVLEMKQPSM QATTQHAMLP TLMDQKTSNY 60 GQDPKKKRLS NEQLELLENS FQEEIKLDPD RKIKLAKELG LQPRQIAVWF QNRRARWKAK 120 QLERLYDALK QEFDAVSRDK QKLQQEVLAL RAILKDQVGK KQVSAGYTEI SGEETVESTS 180 IPSSDKPNNL HQIAECSYNT LNVDDYNNNN HNNKNNINNP VIITPYWPSL P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 94 | KKKRLSNEQLELLENSFQEEIKLDPDRKIK |
2 | 113 | 121 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-44 | HD-ZIP family protein |