PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 88aa MW: 10420.2 Da PI: 6.7906 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.4 | 8.4e-17 | 7 | 61 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......k 50 +ppGfrFhPt+eelv +yL++k+++ k++l +vi ++d + +ePwd++ k PIN11117.1 7 VPPGFRFHPTEEELVGHYLRRKINSMKIDL-DVIIDIDPCPMEPWDIQGmlfilhK 61 69****************************.99**************833444432 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGHYLRRKIN SMKIDLDVII DIDPCPMEPW DIQGMLFILH 60 KKYAKERPKY HIIDPLGDPN KAIRHMHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-22 | NAC family protein |