PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10982.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 316aa MW: 35790.1 Da PI: 7.4669

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7.2e-05	158	177	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PIN10982.1 158 FSCPLCFKTFNRYNNMQMHM 177 89*****************9 PP
2	zf-C2H2	14.6	9.7e-05	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PIN10982.1 242 FMCRKCGKAFAVRGDWRTHEKNC 264 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MADPYYTLFN LNPTNHIPPS SSSSTTKHSY NLNFHNSFFY KTNSPPSPPL KEALPLLSNL 60 NPKTPSEHQE YSSSSAMEVD NINMKNIEDE DESLTVTLNL GLPNSCSDFT TDHCDENSST 120 LISSSSNNKE EEVTLSPLNK GQYWIPTPAQ ILIGPTQFSC PLCFKTFNRY NNMQMHMWGH 180 GSQYRRGPES LRGTQPTAML RLPCYCCAPG CRNNIDHPRS KPLKDFRTLQ THYKRKHGIK 240 PFMCRKCGKA FAVRGDWRTH EKNCGKLWYC SCGSDFKHKR SLKDHIKSFG SGHGACGVDC 300 FEEEEPASEI EQDNEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-125	C2H2 family protein