PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19215.4 Da PI: 7.5121 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.3e-18 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+WvAe+r p++ r r++lg++ +a eAa+a++aa +l+g PIN10926.1 15 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYESAAEAARAYDAAVFCLRG 64 69*****99.*******888732...5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MVRPRTRRER DREGRYKGVR MRKWGKWVAE VRQPNSRDRI WLGSYESAAE AARAYDAAVF 60 CLRGPSAVLN FPDDPPDILS PDELSPSQIQ VAASKHARRL VGGAPVAVGD QLKPPVVENL 120 FFGEPAELGS SSFSEFHGGE SYLAADGIRK GAGGGGGADE TVDGGVYFDT SRMWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-26 | ERF family protein |