PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10842.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 338aa MW: 38874 Da PI: 7.5281

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.6	1.6e-55	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL +k+ ++++ + +i evd+++vePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ ++ l PIN10842.1 16 LPPGFRFHPTDEELITHYLSPKILNDSFCT-IAIGEVDLNRVEPWDLPWKAKIGEKEWYFFCVRDRKYPTGLRTNRATNAGYWKATGKDKEIFR-DRIL 112 79***********************888.78***********98999**************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfy+grap+gekt+Wvmheyrle PIN10842.1 113 VGMKKTLVFYRGRAPRGEKTNWVMHEYRLE 142 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MESSYGFNPN DEPIELPPGF RFHPTDEELI THYLSPKILN DSFCTIAIGE VDLNRVEPWD 60 LPWKAKIGEK EWYFFCVRDR KYPTGLRTNR ATNAGYWKAT GKDKEIFRDR ILVGMKKTLV 120 FYRGRAPRGE KTNWVMHEYR LEGKQSMHTL PKASKVPKTS KNEWVICRIF KKSSGGKKVH 180 ISGLLGIRNS ESNSQSSDLP PLLDLSSDEN QTRTTVEGSH VTCFSILTKH PRQNLVDELS 240 SASRNCDFSS LPFTFPKVST LNSIYSSQIV QSLSYTDPVL AHDQSIQQLL VENNVKQNVR 300 PEFLEDMPYN EVRFKSFDDQ EFPIFSTAPV DLDCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-117	NAC family protein