PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN10494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27974.1 Da PI: 8.8381 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.5 | 3.8e-47 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+++yL++ v gkkl+ +vi ++iy+++P++Lp +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+dk++ls+ ++ PIN10494.1 12 PGFRFHPTEEELLDFYLRNMVFGKKLRG-NVIGLLNIYNYDPRELPGLAKIGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDKKILSSsdPKKM 109 9*************************99.99***************8888899**************************************98766778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 glkktLvfy+grap+g+ktdWvm+eyrl PIN10494.1 110 LGLKKTLVFYEGRAPRGRKTDWVMNEYRL 138 ***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
MDDSSTSQLE LPGFRFHPTE EELLDFYLRN MVFGKKLRGN VIGLLNIYNY DPRELPGLAK 60 IGEREWYFFV PRDRKHGTGG RPNRTTEKGF WKATGSDKKI LSSSDPKKML GLKKTLVFYE 120 GRAPRGRKTD WVMNEYRLPD SCSLPKDIVL CKIYMKATSL KVLEQRATRE EEIKTYPSPT 180 TPPVDSDSFF NQFGDTWTCN SIILPKGREN LTELQMPKFT MDWSQDSFWT LENLTPFLPM 240 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 6e-95 | NAC family protein |