PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN10374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 101aa MW: 11533.4 Da PI: 10.7495 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 17 | 63 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W++ Ed++lv+ ++++G +W++ ++ g+ R++k+c++rw +yl PIN10374.1 17 GPWSPAEDLRLVNFIQKHGHSNWRALPKQAGLLRCGKSCRLRWINYL 63 89*****************************99************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MGKGRAPCCD KSKVRAGPWS PAEDLRLVNF IQKHGHSNWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG HFTPEEEQTI INLHNSIGNK YITLNSLLKT P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 1e-53 | MYB family protein |