PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10201.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family E2F/DP
Protein Properties Length: 354aa    MW: 38847.3 Da    PI: 6.6355
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.21.2e-27101183271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PIN10201.1 101 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpnnnlaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 183
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVNHSNDNSI SNREDGNKNS SIISKGCGAM VTTVSGQSMS TSGSGGSPSS RSEAATATPA  60
SDSTFIRLNN PDFQGDDAGS QGPAGNRKKK RGQRAVGGDK SGRGLRQFSM KVCEKVESKG  120
RTTYNEVADE LVAEFADPNN NLASPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ  180
WKGLPRTSLN DIEELKTERL GLRSRIEKKA AYLEELEEQY IGLQNLIQRN EQIYGSVNAP  240
SGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCGKTQVD  300
GAMQNIPADG GESSSMADVY QPQIPHPSRS NILCRTPTSP SLPGILKARV KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-139E2F/DP family protein