PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10063.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 270aa MW: 30825.7 Da PI: 6.4034

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	199	232	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ PIN10063.1 199 WPYPTEEEKNRLSEVTGLDQKQINNWFINQRKRH 232 58*****************************885 PP
2	ELK	35.3	2.5e-12	152	173	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+rKYs yL++L++EF+ PIN10063.1 152 ELKEMLMRKYSRYLSTLRKEFL 173 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MPDLIKAQIA NHPLYPNLVA AYIECRKVGA PPEMASLLEE ISKENHPIST CSIQIGTDPE 60 LDDFMKSYCE VLHKYKEELS KPFDEATNFL SSIESQLTHL CKQTLPSTTY SYNSADHVGG 120 PSDEDMSYGE LKAASGSQDQ QYCSGNRQGS QELKEMLMRK YSRYLSTLRK EFLKKRKKGK 180 LPKDARTALL DWWNTHYRWP YPTEEEKNRL SEVTGLDQKQ INNWFINQRK RHWRPSEDMR 240 FALMEGVSGS MNEGPMYFDD ASGGTGGVGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	177	LRKEFLKKRK
2	174	178	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	6e-77	TALE family protein