PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 406aa MW: 46492.5 Da PI: 5.2052 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.5 | 1.3e-53 | 25 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv + +++ i+evd++++ePw+Lp ++k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g PIN09961.1 25 LPPGFRFHPTDEELITFYLASKVFNGTFSG-VEIAEVDLNRCEPWQLPDAAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAsSGG 122 79*************************999.45***************8888999**************************************987788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+gekt+Wvmheyrl PIN09961.1 123 LLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 152 9***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence |
MMMGMEEEIL CELEERDDEM NERGLPPGFR FHPTDEELIT FYLASKVFNG TFSGVEIAEV 60 DLNRCEPWQL PDAAKMGERE WYFFSLRDRK YPTGLRTNRA TGAGYWKATG KDREVYSASS 120 GGLLGMKKTL VFYKGRAPRG EKTKWVMHEY RLDGDFSCRH TAKEEWVICR IFHKIGEKKT 180 PTMLQEQSYL LKPSPFSTTT TNSNSLPPLL EPPPTLLETQ SQNQDYRHPP IMQITLNQNQ 240 NSFLVHTQEY SHDFKTLINP LVDPFLVNNS NLSSFTNKDS NILLKPFLSH EYQDLTTFKE 300 LSNAIAKQCK KEPNILQPPD VQIRSSTDGF GTMNMNMNMQ YWAERKIQDN SKYDQNPFLF 360 GSSGAADEMG IPSGTLVEGV DNINVNAIDA ADVDHVMSTE PAFKWW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 4e-98 | NAC family protein |