PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28436.4 Da PI: 4.4844 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.4e-17 | 25 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa+a++ a+ +++g PIN09832.1 25 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYSTQEEAAAAYDMAAIEFRG 76 89****99***********99644...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MQKLTKEEYL ASLRRQSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVCGNK YLYLGTYSTQ 60 EEAAAAYDMA AIEFRGPNAV TNFDISNYAN KLKKDLPDAQ VRQEEVQVKH EMNANPIPPN 120 KVQPDEAQDH QEDTNQVFVP KLETIDSIDS HGIVVMDPTE EHEHPWDLCL DIGFNILQVP 180 DIPLEQASEV FDYKGFEDDI ECIFDGPFDD GEFLMSGKAE ADDVLVAHRE LKGQDASTSP 240 SSSSVSTTSV CSNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.2 | 1e-51 | ERF family protein |