PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09725.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 22575.3 Da PI: 9.9412 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.7e-16 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l++av G+++W Ia++ g++R++k+c++rw +yl PIN09725.1 23 RGPWTAEEDRRLAKAVDIDGPKQWPIIAAKSGLNRCAKSCRLRWMNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 76 | 121 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia++++ Rt++++k++w+ +l PIN09725.1 76 RGNISDQEEDLIIRLHKLLGNR-WSLIAARLP-SRTDNEIKNYWNYHL 121 78999*****************.*********.***********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MAGATANASI KGKQRPPNKK LNRGPWTAEE DRRLAKAVDI DGPKQWPIIA AKSGLNRCAK 60 SCRLRWMNYL RPNIKRGNIS DQEEDLIIRL HKLLGNRWSL IAARLPSRTD NEIKNYWNYH 120 LRKKKLDKGF NDVGNSTRDM GSKNDHKNEE KNIRANSSNG GEEDEKATVD DVDDFFDFSN 180 ENPSTLEWVT KFLEYSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-50 | MYB family protein |