PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09583.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 311aa MW: 34597.2 Da PI: 8.9842

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3e-53	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+++ +l++ +i++vd+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ +++ PIN09583.1 16 LPPGFRFHPTDEELVVHYLKNKAAAAPLPV-AIIADVDLYKFDPWELPAKAIFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTAgGTQ 113 79**************************.88***********7777899**********************************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl PIN09583.1 114 KVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MESTDSSTGS PPQPQLPPGF RFHPTDEELV VHYLKNKAAA APLPVAIIAD VDLYKFDPWE 60 LPAKAIFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPVLTAG GTQKVGVKKA 120 LVFYGGKPPK GIKTNWIMHE YRLADNKPIS KPPGCDFVNK KGSLRLDDWV LCRIYKKNNV 180 QRAADQERDD INDLMIGSIP PNISLQQNDQ NLFGGIMNDP MNPSCSKAIP NFPLMANNLL 240 PTKRMIPSLF WNNEGNENPS STKRFLSSDQ NETNSIATIL GQLPQTPSLG NLGDGVFGQQ 300 AYQVHGMNWY S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-109	NAC family protein