PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09582.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 308aa    MW: 34178.7 Da    PI: 8.5526
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09582.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.25.7e-52141401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+v+yL++kv+g++++l e+i +vd+yk++ wdLpkk+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++
  PIN09582.1  14 LPPGFRFHPTDEELLVQYLCRKVAGHHFSL-EIIGDVDLYKFDAWDLPKKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTVDGRK 111
                 79***************************9.99***************888889********************************************* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfy g+apkg+kt+W+mheyrl
  PIN09582.1 112 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 140
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGIRGADPNS QLSLPPGFRF HPTDEELLVQ YLCRKVAGHH FSLEIIGDVD LYKFDAWDLP  60
KKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTVDGR KVGIKKALVF  120
YVGKAPKGTK TNWIMHEYRL YESPRMNQSK RLDDWVLCRI YERNSNGPKP NISGSSSPCS  180
SQYDDVMETL PEIGNTFSSS PQINSLNKLD EEKDQKLNLD WTTLAGLGPI WPEDARAQNM  240
GLRNNVCAPA SVGDNKVHSG PGLFRQDITG SGQGFPGLVD PLGVLYPVQP GGPGYIASEK  300
VNVLGVNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-111NAC family protein