PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09557.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 449aa    MW: 51943.8 Da    PI: 9.0844
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09557.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH201.2e-06423442525
                 --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                  C+++a  G C yGdrCk+ H
  PIN09557.1 423 KCKYYAL-GRCYYGDRCKYLH 442
                 5**9999.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MSSITIMGSS EEQRYDESET DTEYSDDSQE DPSFDVLEET RLTFSNFSIR RNSKTRIDKG  60
KDEKEEQELD VIEMVVPELE EKDKKSYETI QKIIEAGQVE KLKVEECKIY LRKHGLRLSG  120
KKETLIQRIK EHIDISNGGG EKKYPASSFV FNCKGDACMG DVVMFEQNVY EVFNVASRSA  180
NGPPCGTRVV AGLIVKESYG AAKQQHTFTI EVLWSKGKKP LPPLHQLLIK GRNLYRLKTM  240
RQKWDDEGER QKILSEKHAR GGVARLNRGS RIQQREMQKT QNPTRAKRNE NNNRKQEGKR  300
ESLHSVSMKP EIHGYTKTCE PSIPIQLENL HLKLNNISNP LAIPECLPQR QPLINMNYGF  360
RRLGLRNEHH MNHHLIRDPM QGGQSNVNFC NSYRQQSHAY HRQNLNAAWN PPVQEEAYEQ  420
KQKCKYYALG RCYYGDRCKY LHEVAGNKL