PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09536.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ARR-B | ||||||||
Protein Properties | Length: 470aa MW: 53340.6 Da PI: 6.7987 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 75.3 | 8.3e-24 | 188 | 241 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+ W+ +LH++Fv+av+ + G +kA Pk+ilelm+v+ L +e+v+SHLQkYRl PIN09536.1 188 KPRVIWSADLHQKFVKAVNLI-GLDKAGPKKILELMEVPWLKRENVASHLQKYRL 241 79*****************99.********************************8 PP | |||||||
2 | Myb_DNA-binding | 30.2 | 1e-09 | 192 | 240 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++++++++v+av++ G + +k+I + m + ++++ s++qky+ PIN09536.1 192 IWSADLHQKFVKAVNLIGLDkaGPKKILELMEvPWLKRENVASHLQKYR 240 5********************************999************7 PP | |||||||
3 | Response_reg | 66.3 | 1.4e-22 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vd +p ++ l+++ +k +y e++++ +eal+ll+e++ +D+++ +mp+m+G+e+l++ + ++p+i++++ ge + + ++++ Ga PIN09536.1 20 VLLVDHDPESLKYLEKLHKKCKY-EITTCNLMQEALKLLRERKdrFDIVISEFNMPDMNGFEFLQHVSLQM-DIPVIIMSSDGETSRVMNVVEKGAC 114 89*********************.***************888778**********************7755.9************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ +el++ PIN09536.1 115 DYLVKPIRLKELRN 128 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MVLGGLSSSS SSSFPEGLRV LLVDHDPESL KYLEKLHKKC KYEITTCNLM QEALKLLRER 60 KDRFDIVISE FNMPDMNGFE FLQHVSLQMD IPVIIMSSDG ETSRVMNVVE KGACDYLVKP 120 IRLKELRNIW QHVLRKRVQH VRDIEHPAEI QTSRNESGQP DTILGKKRKD FENKNHDREC 180 GDRSSVKKPR VIWSADLHQK FVKAVNLIGL DKAGPKKILE LMEVPWLKRE NVASHLQKYR 240 LNLSRMQKEK ELKAASGWIK RSDIFTKDVY FQHSVSQNVV TTENFVPGGL HIHDATICEG 300 NPSAILSTPV ALESNNTVFR DVIDPPISTT SGISFNQSFG PPDSKVHSQH IIQNQFTWSA 360 KVPSIQFQQQ LKPHYVIGEA ADIENAAAFF WGLQGNLTFN PDSSSTWTTM NHSSEQNLHD 420 NLLISDGFSS FVDIYAENPE LLDFESSNDF QAKNLSIPVE NLVIDPAHPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-105 | ARR-B family protein |