PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09534.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 216aa MW: 25073.7 Da PI: 6.3954

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lvd + G +W+++++ g+ R++k+c++rw +yl PIN09534.1 14 RGPWTIEEDSKLVDFILNNGIQCWRLVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	56.8	5.1e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E++ +++++ +lG++ W++Ia++++ gRt++++k++w++ PIN09534.1 67 RGAFTEAEEDMIIELHSRLGNR-WSKIAAHLP-GRTDNEIKNHWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MGRQPCCEKV GLKRGPWTIE EDSKLVDFIL NNGIQCWRLV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAF TEAEEDMIIE LHSRLGNRWS KIAAHLPGRT DNEIKNHWNT RIKKKLKLLG 120 LDPITHKPIE HESDQEIHHN MEFQEPEDCQ ILQQKTEEAL ISGSNQAKNE CFVKNMEMGS 180 SLMIQNLEPM ESFSVDSWMD SPFLWDGFSN FGESFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	1e-81	MYB family protein