PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 26689 Da PI: 4.6851 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.5 | 1.1e-18 | 13 | 78 | 1 | 64 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew...yfFskr 64 lppGfrFhPtdeel+++yL +k+++ +++ ++i +vd++k+ePwdLp v++ ++ew F k+ PIN09479.1 13 LPPGFRFHPTDEELITYYLINKISDANFTG-RAIGDVDLNKCEPWDLPVLVSKIQDEWvvcRVFQKS 78 79*************************999.89***************7555555677333234333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MAAEGGEMKD EKLPPGFRFH PTDEELITYY LINKISDANF TGRAIGDVDL NKCEPWDLPV 60 LVSKIQDEWV VCRVFQKSAG GKKYPSNHSR AVNPYTYNLD QIPQNPMQPQ MIQPDNFQFP 120 GRNYMTPAEM QEFNKVFRGA ASTSMINLPI SPQVTYGPPG GSPFTISGLH INLSGGVAPS 180 QPFMRAAPPP PGMNQQDASS AMLNGGGPIG DQAAGYGGDM NNANAMNGRF MSMDADLDNY 240 WPSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 4e-26 | NAC family protein |