PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21948.7 Da PI: 4.5868 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.1 | 2.9e-20 | 53 | 102 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+taeeAa a+++a+ +++g PIN09256.1 53 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAEEAALAYDQAAFAMRG 102 9*******.**********.3433.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MHPYSDPLHL PFNENDSQEM LLYGVLEEGA AAASCGGGGY SPESQSSNGE VMYRGVRRRP 60 WGKYAAEIRD STRNSVRVWL GTFDTAEEAA LAYDQAAFAM RGTEAVLNFP VEVVWESLKE 120 MRLEAAESSP VLALKKRHSM QRKMVCRKKK EMKDMVVLED LGSDYLEELL SMSESSEPGC 180 QSPLDEVIST FFQNFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 150 | KKRHSMQRKMVCRKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-45 | ERF family protein |