PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08785.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 290aa    MW: 33168.1 Da    PI: 5.1997
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.72.2e-1622112186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +++   k + + +s++p+f+qle
  PIN08785.1  22 CWTEEATATLVDAWGRRYLELNRGNLRQKDWQEVADAVnarhgHTKKTRRTDVQCKNRIDTLKKKYKMETAKIAKSNGTLTSSWPFFSQLE 112
                 8*************************************99888888999*******************99999998888889*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGDLTESSMP PSSRQVPFRE DCWTEEATAT LVDAWGRRYL ELNRGNLRQK DWQEVADAVN  60
ARHGHTKKTR RTDVQCKNRI DTLKKKYKME TAKIAKSNGT LTSSWPFFSQ LEMLLRSNFN  120
KHHNKFTPVS VSATPLQSSQ STPPLYLPSP PMAKHPMPSP AVDESYFRRN YSAMAAAEDE  180
ADADEDDGES EGEEAEGSED RAVEEDEEGE EGMRRLANAI ERFGEIYEKV ESMKQKQMVE  240
LEKQRMQFAK DLEVQRMRLF MDTQVQLEKI KQAKRYGSSD GTIAGYCIFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-65Trihelix family protein