PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08722.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 716aa MW: 79812.6 Da PI: 4.4477

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32	2.8e-10	567	608	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rWT+++ el+++a++q+G++ + I + ++ Rt+ q+k+++ k PIN08722.1 567 RWTKQDTELFYEAIRQFGTD-LSMIQQLFP-DRTRRQIKLKYKK 608 8*****************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MGNDFDPLDD IFAEEAVKNA RPVGKFQPKA KFRPAKRDSA AASISLLRPA VQSTNSVQGE 60 SGDPVGTAKP SDHLISGSDV VLNDGGGLHA SMEKSARENA DIFIGLETLG DFLPHATTDM 120 ESAVHPPEAV ALNVSNPENV GGLANPVLSS VEHSSQTGNV VDVHTCPEVS AELDPLTAGE 180 PLVSSSDGHG PMQDTELGRE VKEMDVMGSI DISELTTKSA QRKGKFQPKP KIQMHKEKEI 240 CEVSEPVSHS LDSQSVPPEI SYGEKDSNPL FQQDDVLDLS SLEFSHTLPT EVTAELPLNE 300 ESMNPIEMTQ MESGTHLEGV PEVPAKLASR RAKTGSSEPA TASDPSLQQQ RSSTPHQENE 360 TGRTLRPRKS KTNFCELDEA EEEVLANGEF SEECPLESAL EEENINNEEF QVESESQMRK 420 VKWKSQKTDD DKEKPARKRK KAKEASDQDA GAKPKKFSHS TRRRREDKAL LETPEDEIDY 480 QKVPLRDLIL LAEHKEKLMK KEEAAAGASA TKQSNGESSG RYNENDTFTS NLGDGEYNDG 540 QGSPTRFEET TVFFNYQTYM DKTPIARWTK QDTELFYEAI RQFGTDLSMI QQLFPDRTRR 600 QIKLKYKKEE RQHPLRLREA LTNRPKDHSH FEKVIERLKQ IAAEENQNAD EDDLIDLTDN 660 EIGDDGTSKT ENEEPKDEHV EEEEKGDVAN EFVEAESPLK SDDNEEDFWS QYKSDI

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MGNDFDPLDD IFAEEAVKNA RPVGKFQPKA KFRPAKRDSA AASISLLRPA VQSTNSVQGE  60
SGDPVGTAKP SDHLISGSDV VLNDGGGLHA SMEKSARENA DIFIGLETLG DFLPHATTDM  120
ESAVHPPEAV ALNVSNPENV GGLANPVLSS VEHSSQTGNV VDVHTCPEVS AELDPLTAGE  180
PLVSSSDGHG PMQDTELGRE VKEMDVMGSI DISELTTKSA QRKGKFQPKP KIQMHKEKEI  240
CEVSEPVSHS LDSQSVPPEI SYGEKDSNPL FQQDDVLDLS SLEFSHTLPT EVTAELPLNE  300
ESMNPIEMTQ MESGTHLEGV PEVPAKLASR RAKTGSSEPA TASDPSLQQQ RSSTPHQENE  360
TGRTLRPRKS KTNFCELDEA EEEVLANGEF SEECPLESAL EEENINNEEF QVESESQMRK  420
VKWKSQKTDD DKEKPARKRK KAKEASDQDA GAKPKKFSHS TRRRREDKAL LETPEDEIDY  480
QKVPLRDLIL LAEHKEKLMK KEEAAAGASA TKQSNGESSG RYNENDTFTS NLGDGEYNDG  540
QGSPTRFEET TVFFNYQTYM DKTPIARWTK QDTELFYEAI RQFGTDLSMI QQLFPDRTRR  600
QIKLKYKKEE RQHPLRLREA LTNRPKDHSH FEKVIERLKQ IAAEENQNAD EDDLIDLTDN  660
EIGDDGTSKT ENEEPKDEHV EEEEKGDVAN EFVEAESPLK SDDNEEDFWS QYKSDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	436	442	ARKRKKA
2	437	441	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-39	MYB_related family protein