PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08514.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 744aa MW: 85455 Da PI: 8.5792

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.1	4.5e-21	52	126	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA++vGF++r+ + ++s+ +g++++r+fvCskeg++++ +rtgC a ++v+k ++gkw+++++++eHnH++ PIN08514.1 52 EFYSAYATQVGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKVDSGKWVLANIKKEHNHDF 126 6*************************************987..............589*************************97 PP
2	FAR1	51.7	2.9e-16	186	252	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +GF++r+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w+v++l++eHnHe+ PIN08514.1 186 IGFRIRIGQLFRSKHDGSITSRRFVCSKEGHQHP--------------SRVGCGAYMRIQRQESGRWVVDRLQKEHNHEFE 252 7***************************9998..............4899************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MNREEFGNVM TVRTKPAALV VAKSNGHQDV GGQSKMEPHV GLEFDSAEEA QEFYSAYATQ 60 VGFKIRIGQL YRSRVDGSVI SRRFVCSKEG FQTNSRTGCP AFIRVQKVDS GKWVLANIKK 120 EHNHDFEASG ELCPPRIQRK TFPTPRSSAG GASRTGIRSH EDDGESGVVD MKRHKKEEMD 180 GIVGPIGFRI RIGQLFRSKH DGSITSRRFV CSKEGHQHPS RVGCGAYMRI QRQESGRWVV 240 DRLQKEHNHE FETPTDPSRT VTVASKGYRE EGSSVLENLD LVETNGGLSL VKRVRESNIS 300 SDWYNLLLDY FQTRQAEDTG FFYAVEMRES KGMNMFWADA RSRFSCAQFG DAIVFDTTYR 360 RCSYLMPFAS FVGVNHHRQP VLLGCALVAD ESQESFTWIF QAWLKAMSGH RPVSIIADQD 420 WAIQHSIAQV FPGTHHRFSA WQILAKEQEN VGALLAMDAE FKYEYETCIF QSQTASEFES 480 AWNMLMNKYN LRENPWFKEM YRMRKSWVPL HIKGTFFAGI PVDGSLKSYF SPILTAQTPL 540 KEFIVRYDKA VEQRREEERK EDFNSFNLQP VLHTKDPIEE QCRRLYTITM FKVFQKELLE 600 CYSYVGIKIN VEGAISRYLV QKCGNGDERN TVAFNASKLN ISCSCKMFEF EGVLCRHALK 660 VFQIMNIREL PSRYILHRWT KNAKYGILRD TDSGGGAQDF KALMLWSLRE EARNYIEAGA 720 ASLERYKLAF EIMQEGRRTL CWQN

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MNREEFGNVM TVRTKPAALV VAKSNGHQDV GGQSKMEPHV GLEFDSAEEA QEFYSAYATQ  60
VGFKIRIGQL YRSRVDGSVI SRRFVCSKEG FQTNSRTGCP AFIRVQKVDS GKWVLANIKK  120
EHNHDFEASG ELCPPRIQRK TFPTPRSSAG GASRTGIRSH EDDGESGVVD MKRHKKEEMD  180
GIVGPIGFRI RIGQLFRSKH DGSITSRRFV CSKEGHQHPS RVGCGAYMRI QRQESGRWVV  240
DRLQKEHNHE FETPTDPSRT VTVASKGYRE EGSSVLENLD LVETNGGLSL VKRVRESNIS  300
SDWYNLLLDY FQTRQAEDTG FFYAVEMRES KGMNMFWADA RSRFSCAQFG DAIVFDTTYR  360
RCSYLMPFAS FVGVNHHRQP VLLGCALVAD ESQESFTWIF QAWLKAMSGH RPVSIIADQD  420
WAIQHSIAQV FPGTHHRFSA WQILAKEQEN VGALLAMDAE FKYEYETCIF QSQTASEFES  480
AWNMLMNKYN LRENPWFKEM YRMRKSWVPL HIKGTFFAGI PVDGSLKSYF SPILTAQTPL  540
KEFIVRYDKA VEQRREEERK EDFNSFNLQP VLHTKDPIEE QCRRLYTITM FKVFQKELLE  600
CYSYVGIKIN VEGAISRYLV QKCGNGDERN TVAFNASKLN ISCSCKMFEF EGVLCRHALK  660
VFQIMNIREL PSRYILHRWT KNAKYGILRD TDSGGGAQDF KALMLWSLRE EARNYIEAGA  720
ASLERYKLAF EIMQEGRRTL CWQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	0.0	FAR1 family protein