PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN08397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 375aa MW: 42644.3 Da PI: 6.6262 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.1 | 6.1e-52 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePw++++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PIN08397.1 15 VPPGFRFHPTEEELLHYYLRKKVASQKIDL-DVIRDVDLNKLEPWEIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIHS-N 111 69****************************.9***************964444222455************************************99.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfy+grap+g+k+dW+mheyrl PIN08397.1 112 FRRIGMRKTLVFYRGRAPHGQKSDWIMHEYRL 143 999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MSEDMNLSVN GHSKVPPGFR FHPTEEELLH YYLRKKVASQ KIDLDVIRDV DLNKLEPWEI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIHS NFRRIGMRKT 120 LVFYRGRAPH GQKSDWIMHE YRLDDNTTTH HDSTINASDS SAAGQEDGWV VCRVFKKKNY 180 HKTLESPVTP RNDGVVDQIL MYMGRSPPSS SSPNSCKQEN EFSPNMDHDH FNNPNIQSAA 240 AGFMHLPGLE TPTMNPSIHL SDQDCGGFKS TVNDLMTDHH IRGPSSDWVA LDRLVASQLN 300 GQPCKQYSTI YGTEDQFSFP FDHMHDDAHE MQLLNVDSSD RPNDHQTETD LWNLMTRSSS 360 SLSSSSSDPL CHLSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-112 | NAC family protein |