PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08323.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 242aa    MW: 27105.4 Da    PI: 8.3139
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.61.2e-36141401128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlsk.kg 97 
                 lppGfrF+Ptdee+v +yL++k+ + +l++ +vi+e++i++++PwdLp     ++++ yfFs+r+ +y++  +r+++at  g+Wk tg+dk++ ++ + 
  PIN08323.1  14 LPPGFRFQPTDEEVVFQYLARKTFSCPLPA-SVIPEINIFSFDPWDLP---GDSDQDRYFFSNREPSYRNiVNRSSKATCGGFWKVTGSDKHISCSkRM 108
                 79****************************.99***************...3467899***********96789999****************997344 PP

         NAM  98 elvglkktLvfykg.rapkgektdWvmheyrl 128
                   vg+kktLvfyk+ ++  ++ tdW+mh y +
  PIN08323.1 109 PIVGIKKTLVFYKAkKHTYATGTDWFMHIYCI 140
                 55**********8735566889******9975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDKFNFVRDG SSKLPPGFRF QPTDEEVVFQ YLARKTFSCP LPASVIPEIN IFSFDPWDLP  60
GDSDQDRYFF SNREPSYRNI VNRSSKATCG GFWKVTGSDK HISCSKRMPI VGIKKTLVFY  120
KAKKHTYATG TDWFMHIYCI ALSGNTACNI QNKNINSQGS LIQIGKWILC HIFVKKRNAK  180
AGVYDNCRLR NYDNHQMSED TSDTESCSAS CSSSTSSDSD SSVLSEVSST IANSETSTTP  240
NV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-53NAC family protein