PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07871.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 586aa MW: 63980.8 Da PI: 8.7304

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.4	7e-10	444	492	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + ++k Ka +L + ++Y++sLq PIN07871.1 444 SHSLAERVRREKISERMKCLQDLVPGC---SNKVTGKAVMLDEIINYVQSLQ 492 8************************...8888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MTTKTQKKDK NSPRKSKKDS ISVQINENTP LLMPKKIESS SFSHQDFNGA SFTGAVFNLS 60 TTIMGAGIMA LPATMKVLGL GLGIAVIVFV AVLTEFCVGM LLRYSKAGGA DSYGGVMGDA 120 CGDVGRGILQ VCVVINNIGI LVVYMIIIGD VLSGSSSSGV HHAGVLEGWF GEHWWNGRFF 180 VLVVTTLCVL TPLACFKRID SLRHTSALAV FLALVFLFIT AAIAIVKWIQ GTTTTPRFLP 240 DIIDLNSIWS LFAVVPVLVT AYVCHFNVQS IANELEDRSR IKSVVRTSLA LCSIIYIMTG 300 FFGFLLFGNS TLDDVLSNFD TNLGIPFSSE LNDAVRVSYA LHLMLAFPVI FYPLRLNLDR 360 LLFPSSVPLA SDNRRFSLLT VGLISVVFLG ANFIPSIWDA FQFTGATDAV CLGFIFPAAI 420 ALRSDPPKKE YIQVRARRGQ ATDSHSLAER VRREKISERM KCLQDLVPGC SNKVTGKAVM 480 LDEIINYVQS LQRQVEFLSM KLAAVNPRLD FNIERFLAKD IPQPRTGLSS SLAFSPDITM 540 PFPPLHLPHP SLIPASLPTI RNSSETLQRP TGSVVCAVFN EPTVGV

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MTTKTQKKDK NSPRKSKKDS ISVQINENTP LLMPKKIESS SFSHQDFNGA SFTGAVFNLS  60
TTIMGAGIMA LPATMKVLGL GLGIAVIVFV AVLTEFCVGM LLRYSKAGGA DSYGGVMGDA  120
CGDVGRGILQ VCVVINNIGI LVVYMIIIGD VLSGSSSSGV HHAGVLEGWF GEHWWNGRFF  180
VLVVTTLCVL TPLACFKRID SLRHTSALAV FLALVFLFIT AAIAIVKWIQ GTTTTPRFLP  240
DIIDLNSIWS LFAVVPVLVT AYVCHFNVQS IANELEDRSR IKSVVRTSLA LCSIIYIMTG  300
FFGFLLFGNS TLDDVLSNFD TNLGIPFSSE LNDAVRVSYA LHLMLAFPVI FYPLRLNLDR  360
LLFPSSVPLA SDNRRFSLLT VGLISVVFLG ANFIPSIWDA FQFTGATDAV CLGFIFPAAI  420
ALRSDPPKKE YIQVRARRGQ ATDSHSLAER VRREKISERM KCLQDLVPGC SNKVTGKAVM  480
LDEIINYVQS LQRQVEFLSM KLAAVNPRLD FNIERFLAKD IPQPRTGLSS SLAFSPDITM  540
PFPPLHLPHP SLIPASLPTI RNSSETLQRP TGSVVCAVFN EPTVGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	8e-54	bHLH family protein