PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07815.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 327aa MW: 36289.5 Da PI: 7.473

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.9	3.6e-18	169	223	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PIN07815.1 169 RRKLRLSKEQSAFLEESFKEHHTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 223 567789***********************************************98 PP
2	HD-ZIP_I/II	128.3	3.2e-41	169	258	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ++k+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l PIN07815.1 169 RRKLRLSKEQSAFLEESFKEHHTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENKRLHKELQELR-AL 258 58*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MELALSLGDT DKPKSFSFLD HRQQKILGTD LGFCMALDKV CSHGENLNGI NKETGLSEDQ 60 RRTASSSDPP VQLDLLPFSP VHRSHEPNKF PSFPWRNDYS MAAEPGRGLE VNRRAEEAED 120 GAAVSSPNST GKRSDFEGIY TANNTDEREA DRRASSRGSD EEENGAMARR KLRLSKEQSA 180 FLEESFKEHH TLNPKQKVAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCET 240 LTEENKRLHK ELQELRALKV SSPFYMQLPP TTLTMCPSCE RVVATTTAGS GGATALASTT 300 TTTAAAANSL TELFSLSTSN GQKATSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	226	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	6e-85	HD-ZIP family protein