PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07714.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 443aa MW: 48245.1 Da PI: 5.7107

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	245	323	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC.............................TTS-.STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkas..........................kapskK.lsKaeiLekAveYIksLq 55 hn +E+rR dr N++++ L+el+P++ + ++ ++Ka++L +A+eY+k+Lq PIN07714.1 245 VHNLVEKRRGDRTNEKMHALQELIPNCNetlppgpirsiqhiyehiglkqlnirSFNKAIlVNKASMLDEAIEYLKNLQ 323 5***********************888********************97788889***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MRIEEYNGVE SILNEISSVG LSRNNEMVTC LSYPVGDGVQ DYYSDLLPET SCVTADGELS 60 KDSFVSGDKA SSCDRAQGRT SGPSIGYGVS SISNNISSHK DARFGNWDWG RDALDDSTSM 120 KMQKQNIETS RQPVAKDLKE SFVTKRTDNL CQEISVTDEK APVQINTANS SKGVPDGERS 180 VEPMVDSSSV GSGISADRVS CEETHNSNGK FCDIEESECH IDVGVKKPAS ARGSSGSKRR 240 RTAEVHNLVE KRRGDRTNEK MHALQELIPN CNETLPPGPI RSIQHIYEHI GLKQLNIRSF 300 NKAILVNKAS MLDEAIEYLK NLQLQVQIMT MGARLCMPPM MLSMGTQPMH PAHLPHNSPK 360 GMSTGILDMN GGSPQYPVFP GPPMQGSHVP SSALGAANVH GIPDFDLPVY GHPSQELDGS 420 EPEAPMVHVW MASSDFIHGF KSL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MRIEEYNGVE SILNEISSVG LSRNNEMVTC LSYPVGDGVQ DYYSDLLPET SCVTADGELS  60
KDSFVSGDKA SSCDRAQGRT SGPSIGYGVS SISNNISSHK DARFGNWDWG RDALDDSTSM  120
KMQKQNIETS RQPVAKDLKE SFVTKRTDNL CQEISVTDEK APVQINTANS SKGVPDGERS  180
VEPMVDSSSV GSGISADRVS CEETHNSNGK FCDIEESECH IDVGVKKPAS ARGSSGSKRR  240
RTAEVHNLVE KRRGDRTNEK MHALQELIPN CNETLPPGPI RSIQHIYEHI GLKQLNIRSF  300
NKAILVNKAS MLDEAIEYLK NLQLQVQIMT MGARLCMPPM MLSMGTQPMH PAHLPHNSPK  360
GMSTGILDMN GGSPQYPVFP GPPMQGSHVP SSALGAANVH GIPDFDLPVY GHPSQELDGS  420
EPEAPMVHVW MASSDFIHGF KSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-24	bHLH family protein