PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 28680.3 Da PI: 4.6032 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.4 | 5.1e-13 | 53 | 95 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 Er+RR+++N+++ Lr+++P+ +K++Ka++ + A+eYI+sL PIN07666.1 53 VSERNRRKKLNERLYALRSVVPNI-----TKMDKASTIKDAIEYIQSL 95 57*********************7.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDNIDDEYKN YWETNMFFQS EELDSYFDDP ISAYYDSSSP DGTQSSLASK NIVSERNRRK 60 KLNERLYALR SVVPNITKMD KASTIKDAIE YIQSLHDEER RIQAEISELE SAAAGTGSLS 120 KSSSTIFEFE HQDSATFSSK PKRTRLINDH CYDSPASRLM PSPIELLELR VSNMGEKTIV 180 VSLTCSKRTD TMVKLCEIFE SLKLKIITAN ITAFSGTLLK TVFVEADEEE KEVLRLKIEA 240 AIAALNDPDS PMSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 4e-91 | bHLH family protein |