PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07333.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 831aa    MW: 91103.1 Da    PI: 6.1086
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.4e-18563357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PIN07333.1  5 KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 63
                6789*****************************************************97 PP
2START161.66e-511523592204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e++ ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++  ++  +i +g  g+++l +++ 
  PIN07333.1 152 IAEETLTEFLGKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRLSWFRDCRCLDIASAIPTGngGTIELVYMQI 249
                 6899******************************************************.8999999999****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ryi +l++g++vi+++S++s +  p+   +  +vRae+lpSg+li+p+++g+s +++v+h+d ++++++++lr+l++s+ + ++
  PIN07333.1 250 YAPTTLASaRDFWTLRYITSLEDGSLVICERSLTSATGGPTgppTTCFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDFDASSVPEVLRPLYESSKILAQ 348
                 *************************************9999888999**************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k+++a+l++ +
  PIN07333.1 349 KMTMAALRHIR 359
                 *******9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    
MDASKYVRYT PEQVDALERV YAECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR  60
EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSHLVY ENGYMRQQLH TVSTTTTDTS  120
CDSVVMSGQQ QQNPTPQHPQ RDANSPAGLL AIAEETLTEF LGKATGTAVD WVQMIGMKPG  180
PDSIGIVAVS RNCSGVAARA CGLVSLEPTK VAEILKDRLS WFRDCRCLDI ASAIPTGNGG  240
TIELVYMQIY APTTLASARD FWTLRYITSL EDGSLVICER SLTSATGGPT GPPTTCFVRA  300
EMLPSGYLIR PCEGGGSIIH IVDHIDFDAS SVPEVLRPLY ESSKILAQKM TMAALRHIRQ  360
ISQETNGEIQ YSGGRQPAVL RALSQRLCRG FNDAVNGFVD DGWSIMGSDG VEDVTIAINS  420
SPSKFLGSQY NNLSMLPTFG GVLCARASML LQNVPPALLI RFLREHRSEW ADYGVDVYSA  480
ASLKASPYAV PCAKPGGFPS SQVILPLAQT VEHEEFLEVV RLEGHAFSPE DIALSRDMYL  540
LQLCSGIDET TTGACAQLVF APIDESFGDD APLLPSGFRV IPLEPKSDGP TATRTLDLAS  600
ALEVGHGGAR PAGEADTNNQ NLRSVLTIAF QFAFENHYRD SVAAMARQYI RSIVASVQRV  660
AMAIAPSQLS SHMVPKPLPG SPEAVTLARW ICRSYRVHTG GELIPSDSPA GDAVLKQLWH  720
HTDAIMCCSV KMNASAVFTF ANQAGLDMLE TTLVALQDIM LEKILDEAGR KILLSEFSKI  780
MQQGFAYLPA GVCVSSMGRP VSYEQAVAWK VLNDEDSNHC LAFMFMNWSF V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein