PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26940.1 Da PI: 8.1854 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.2 | 9.9e-19 | 98 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g PIN07282.1 98 SYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAAMAYDQAAFAMRG 148 69*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MDSSFFQFQN QYPFSHYTPA PASHSDEPLS WKYDELSLPF NVNDSEEMLL YGVLSQTAVK 60 ESSETNSNSN SNFNFNYSCK EEEVSSYAKK GEKNREKSYR GVRRRPWGKF AAEIRDSTRN 120 GVRVWLGTFD SAEAAAMAYD QAAFAMRGCA AVLNFPVERV KESLKELKCG VEEGCSPVIA 180 LKKRHSMRKK KNSVLRRRKS NSVEVNSNKV ENVMVLEDLG VEYLEALLSC SSSSSQSW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 106 | KKGEKNREKSYRGVRRRP |
2 | 182 | 199 | KKRHSMRKKKNSVLRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 9e-52 | ERF family protein |