PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07046.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 487aa MW: 52795.2 Da PI: 9.6623

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H PIN07046.1 56 FICEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	12.8	0.00036	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ PIN07046.1 133 WKCEKCSKKYAVQSDWKAHSKTC 155 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MMSGEVFSVP NSTPPNPNPK PISNSNKKKR NLPGTPDPDA EVIALSPKTL MATNRFICEI 60 CNKGFQRDQN LQLHRRGHNL PWKLKQRANK DQIKKKVYIC PEKTCVHHDP TRALGDLTGI 120 KKHFSRKHGE KKWKCEKCSK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR KDSFITHRAF 180 CDALAEESAR ITTVGGNNLN FRSNDLMNPQ SHQNRSFTSP PGIPHLSGVF RPDFAGISTG 240 NALLGDHHQQ KPRLSLWLDH QVNPIDHNSN IFIPSSSSDM INQMASNNLF SSMGNYSNLS 300 LSPLQGMKEE PLSNKGNSNT MADNSLASLY SDNHNASSKS SPAAAMSATA LLQKAAQMGS 360 TKSNPNFFGN TIGVINSSSS SSSELHQVFG KPPPENSKGG SDGGGMMMSN LDHQSIFESS 420 GGQISQSAAT SMSLQSGILH GVENSLTRDF LGMGGDGGAG GPFLPQELAK FASMSSAMGL 480 SHFTGNH

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MMSGEVFSVP NSTPPNPNPK PISNSNKKKR NLPGTPDPDA EVIALSPKTL MATNRFICEI  60
CNKGFQRDQN LQLHRRGHNL PWKLKQRANK DQIKKKVYIC PEKTCVHHDP TRALGDLTGI  120
KKHFSRKHGE KKWKCEKCSK KYAVQSDWKA HSKTCGTREY KCDCGTLFSR KDSFITHRAF  180
CDALAEESAR ITTVGGNNLN FRSNDLMNPQ SHQNRSFTSP PGIPHLSGVF RPDFAGISTG  240
NALLGDHHQQ KPRLSLWLDH QVNPIDHNSN IFIPSSSSDM INQMASNNLF SSMGNYSNLS  300
LSPLQGMKEE PLSNKGNSNT MADNSLASLY SDNHNASSKS SPAAAMSATA LLQKAAQMGS  360
TKSNPNFFGN TIGVINSSSS SSSELHQVFG KPPPENSKGG SDGGGMMMSN LDHQSIFESS  420
GGQISQSAAT SMSLQSGILH GVENSLTRDF LGMGGDGGAG GPFLPQELAK FASMSSAMGL  480
SHFTGNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	6e-99	C2H2 family protein