PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06918.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 491aa MW: 53713.5 Da PI: 5.0769

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.9	2.4e-33	267	321	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmk +gLt++hvkSHLQkYR+ PIN06918.1 267 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKAEGLTIYHVKSHLQKYRT 321 79****************************************************8 PP
2	Myb_DNA-binding	56.2	8.1e-18	269	320	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ PIN06918.1 269 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKaEGLTIYHVKSHLQKYR 320 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MEAKPALPIQ RSGARLISNH GASTDLPSFP VLPTSWEETY PRFSESQHIS LEREVVQRLP 60 AVVSPLSSNS GAVGHIFSSS SGFSSDLHFS SVQPQEKHPR QSPFISQSKS GDKPALLPHS 120 VGSQVLRSTA SSHFNKEYNE SWCTDALPDF LDFPMSTTIQ NSQLDGNNSG SIGIPSEDLG 180 KPNDWQDWAD QLINDNDALA TDWSGLLADA SAVDQGPKIS QQSTDISKQQ PQISQQQHQM 240 SQQLTGTPGE IFTSGGQSSS ANAAPAKQRM RWTPELHEAF VEAVNKLGGS ERATPKGVLK 300 LMKAEGLTIY HVKSHLQKYR TARYKPETTE ESSEKKPASI DDLSSLDLKT GIEITEALRL 360 QMEVQKRLHE QLEIQRNLQL RIEEQGKYLQ MMFEKQSKSG MDLLKGASST SENPSKELLD 420 TMQNSSAKDT SVTEADKKET EDEPAKTSAA ETSQPAGEKQ EALQTGVLIN TEANSAGTSD 480 LPPTKRAKVD E

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MEAKPALPIQ RSGARLISNH GASTDLPSFP VLPTSWEETY PRFSESQHIS LEREVVQRLP  60
AVVSPLSSNS GAVGHIFSSS SGFSSDLHFS SVQPQEKHPR QSPFISQSKS GDKPALLPHS  120
VGSQVLRSTA SSHFNKEYNE SWCTDALPDF LDFPMSTTIQ NSQLDGNNSG SIGIPSEDLG  180
KPNDWQDWAD QLINDNDALA TDWSGLLADA SAVDQGPKIS QQSTDISKQQ PQISQQQHQM  240
SQQLTGTPGE IFTSGGQSSS ANAAPAKQRM RWTPELHEAF VEAVNKLGGS ERATPKGVLK  300
LMKAEGLTIY HVKSHLQKYR TARYKPETTE ESSEKKPASI DDLSSLDLKT GIEITEALRL  360
QMEVQKRLHE QLEIQRNLQL RIEEQGKYLQ MMFEKQSKSG MDLLKGASST SENPSKELLD  420
TMQNSSAKDT SVTEADKKET EDEPAKTSAA ETSQPAGEKQ EALQTGVLIN TEANSAGTSD  480
LPPTKRAKVD E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-83	G2-like family protein