PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06912.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 534aa MW: 59365.2 Da PI: 4.2753

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.7	1.8e-43	16	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 ppG+rF Ptd el+ +yL kkv++++l+l + i +v++y+++P++L + k ++++wyfF++r+kky++g+r++r++ +gyWkatg dk++l + + PIN06912.1 16 PPGVRFAPTDLELIYHYLMKKVNNQPLPL-DEIYDVNLYQYNPETLAeSYPKLGDNDWYFFTPREKKYKNGSRPKRSAGTGYWKATGADKPILLRnhTI 113 9**************************.77**********8456666999*********************************984344 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k+ Lvfy+g++pkg+ktdW+m e+++ PIN06912.1 114 TTIGWKRALVFYQGKSPKGNKTDWMMYEFKV 144 45*************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MAAELNPATL LSRRFPPGVR FAPTDLELIY HYLMKKVNNQ PLPLDEIYDV NLYQYNPETL 60 AESYPKLGDN DWYFFTPREK KYKNGSRPKR SAGTGYWKAT GADKPILLRN HTITTIGWKR 120 ALVFYQGKSP KGNKTDWMMY EFKVDQPQPS RNKRGGDGMR LDDWVLCRIY KKANRSRENS 180 QQAAEASPLE DSPPVDQNNS PEFIEADDPE VDNNENLAQI ENTVATLDSP EVGNNNTNNN 240 LGPIVIHDDN ATQVGANSYD INGVPLVPSI SEQADWIVQD LANFSIDPPS QNALPQNVPE 300 ASSYHINFGF DGVTNSFEQP QNVPESLFFG EGWGIQKGDF QVQECFLETQ YSTNPPQMGH 360 SLFGPSTSNL SESKIGIEDY DKDGVTNSFA QAQHVSEPSF FDMAGCGFQE GDFQFQEGFN 420 WKTLYSTDPP QTEPSHFGPS TSNLSKSKIE LEDYDKDGVT NPFAQPQDVS ASSVLDIQGC 480 DIQKANFQVQ EGLWEIIYPS DVPPQSGLSH CGPSGGNSSE SEIKVGDCQK DGLG

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MAAELNPATL LSRRFPPGVR FAPTDLELIY HYLMKKVNNQ PLPLDEIYDV NLYQYNPETL  60
AESYPKLGDN DWYFFTPREK KYKNGSRPKR SAGTGYWKAT GADKPILLRN HTITTIGWKR  120
ALVFYQGKSP KGNKTDWMMY EFKVDQPQPS RNKRGGDGMR LDDWVLCRIY KKANRSRENS  180
QQAAEASPLE DSPPVDQNNS PEFIEADDPE VDNNENLAQI ENTVATLDSP EVGNNNTNNN  240
LGPIVIHDDN ATQVGANSYD INGVPLVPSI SEQADWIVQD LANFSIDPPS QNALPQNVPE  300
ASSYHINFGF DGVTNSFEQP QNVPESLFFG EGWGIQKGDF QVQECFLETQ YSTNPPQMGH  360
SLFGPSTSNL SESKIGIEDY DKDGVTNSFA QAQHVSEPSF FDMAGCGFQE GDFQFQEGFN  420
WKTLYSTDPP QTEPSHFGPS TSNLSKSKIE LEDYDKDGVT NPFAQPQDVS ASSVLDIQGC  480
DIQKANFQVQ EGLWEIIYPS DVPPQSGLSH CGPSGGNSSE SEIKVGDCQK DGLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-52	NAC family protein