PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06388.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 397aa MW: 44637.2 Da PI: 5.1531

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06388.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.3e-52	26	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yL++kv gk++++ ++++e+d+yk+ePw+L +++k+++ ewyfFs+ dkky +g+r nrat +gyWkatgkd+ v + k+ PIN06388.1 26 LAPGFRFHPTDEELVRYYLRRKVCGKPFRF-QAVTEIDVYKSEPWELAdySSLKTRDLEWYFFSPVDKKYGNGSRLNRATGKGYWKATGKDRCVRH-KN 122 579***********************99.88**********84347777888*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++grap+g++t+Wvmheyrl PIN06388.1 123 QTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 153 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEMGQEVVVS AVGTPAAMGN PPPTSLAPGF RFHPTDEELV RYYLRRKVCG KPFRFQAVTE 60 IDVYKSEPWE LADYSSLKTR DLEWYFFSPV DKKYGNGSRL NRATGKGYWK ATGKDRCVRH 120 KNQTIGMKKT LVFHSGRAPD GKRTNWVMHE YRLCDSELEK ARVSQDAFVL CRIFQKSGLG 180 PPNGDRYAPF VEEEWDDYAA LVVPGGDTED DVANGEEARV ECTDLDQDTQ PLSIAPPIVE 240 DPIESPNLPL ACKRERSGEP EPESLSLAQS KRSKHDDPNS NHANGSEDST TTSHNPPTMM 300 MTKNISSSLL EFPLLESIGS KENLSSNTPM FDSSNLEKSV PPGYLKFISN LENEILNVSI 360 EKETLKIEVM RAQAMINILQ SRIDVLTKEN EEIRRRA

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEMGQEVVVS AVGTPAAMGN PPPTSLAPGF RFHPTDEELV RYYLRRKVCG KPFRFQAVTE  60
IDVYKSEPWE LADYSSLKTR DLEWYFFSPV DKKYGNGSRL NRATGKGYWK ATGKDRCVRH  120
KNQTIGMKKT LVFHSGRAPD GKRTNWVMHE YRLCDSELEK ARVSQDAFVL CRIFQKSGLG  180
PPNGDRYAPF VEEEWDDYAA LVVPGGDTED DVANGEEARV ECTDLDQDTQ PLSIAPPIVE  240
DPIESPNLPL ACKRERSGEP EPESLSLAQS KRSKHDDPNS NHANGSEDST TTSHNPPTMM  300
MTKNISSSLL EFPLLESIGS KENLSSNTPM FDSSNLEKSV PPGYLKFISN LENEILNVSI  360
EKETLKIEVM RAQAMINILQ SRIDVLTKEN EEIRRRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	1e-111	NAC family protein