PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 707aa MW: 78363.9 Da PI: 6.7868 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.1 | 1.7e-19 | 40 | 95 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t++q++++ee+F+++++p+ ++r+eL++ lg++ qVk+WFqN+R+++k PIN06274.1 40 RKRYHRHTPHQIQQMEEFFKECPHPDDRQRKELSRVLGMEPLQVKFWFQNKRTQMK 95 789999***********************************************999 PP | |||||||
2 | START | 172.8 | 2.2e-54 | 226 | 444 | 1 | 203 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 ela +a++el++ al +ep+W s +n++e+l++f++ + +++ea+++s+vv m++a++ve+l+d+ qW + + +a++le i PIN06274.1 226 ELAIAAMDELMRIALQGEPLWLPSMdqntCLLNEEEYLRSFSR-IFgpklkgFKSEASKESVVVAMNSADVVEILMDVD-QWANVFSglvsRATILEII 322 57899********************65555579********76.44799999***************************.******************* PP CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS START 86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177 s g +alq+m+ae+q++splvp Rd++fvRy++q+ +g+ ++vdvS d+ q+ p + v ++++pS+ +++++ ng+skvtwvehv++++r + PIN06274.1 323 SCGvggnynEALQVMNAEFQVPSPLVPvRDSYFVRYCKQHMEGTSAVVDVSFDHLQCSP---PPVTCRRRPSCVVVQDMRNGYSKVTWVEHVEVEDRGI 418 *********************************************************77...68999******************************** PP HHHHHHHHHHHHHHHHHHHHHHTXXX CS START 178 hwllrslvksglaegaktwvatlqrq 203 h+++++l+ gla+gak+wva l + PIN06274.1 419 HNIYKPLITAGLAFGAKRWVAILVGH 444 *********************98655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MRSDMSKYDE VEHMKNEESD SKSDSDNSNV NSIEVQPSKR KRYHRHTPHQ IQQMEEFFKE 60 CPHPDDRQRK ELSRVLGMEP LQVKFWFQNK RTQMKTQHEH QENTQLRIEN ERLRAENMRY 120 REALSNASCP SCGIPTPIAA ETSFHEQQLR VENARLQEEI DHISAIATKY VGKPFKNFMD 180 ASSSTTPHVI SLSSAGNFKE SSEATDLESL TNDVRRSASY GPIVIELAIA AMDELMRIAL 240 QGEPLWLPSM DQNTCLLNEE EYLRSFSRIF GPKLKGFKSE ASKESVVVAM NSADVVEILM 300 DVDQWANVFS GLVSRATILE IISCGVGGNY NEALQVMNAE FQVPSPLVPV RDSYFVRYCK 360 QHMEGTSAVV DVSFDHLQCS PPPVTCRRRP SCVVVQDMRN GYSKVTWVEH VEVEDRGIHN 420 IYKPLITAGL AFGAKRWVAI LVGHSQRTAI LAAATKISSN EANHLANQEG IKGMLKLAER 480 MVTRFCCGVG ASTSNAWTTL SGNGTDNVKV MTRKNLDDPS MPFGVQLNIA TSFWLPIPPK 540 RVFDFLRDHC TRKKWDMLWN GGDFKEIAHV TSGKEVGNRV SIYQGGNPSQ SKMIMLQESR 600 TDPTASYVVY GPVDTVSMNA ILGGGDPSYA PLLPSGFAIL PDGPTGGQGR GMPPQAETGG 660 SLLTVALQVL VDSSPNAKPS MGSIAAANNL ISCTIDNIKK ALIPNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.3 | 0.0 | HD-ZIP family protein |