PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06228.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | FAR1 | ||||||||
Protein Properties | Length: 220aa MW: 24728.9 Da PI: 6.0632 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.1 | 1.7e-24 | 56 | 145 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++ + ++s+ +g++ ++ C+++g++ + k k+ +++r++ r gC a++ k+ek+gkw+vtk+++eHnH+l+ PIN06228.1 56 RFYSDYARRVGFVVCIMQRRRSDIDGRTLACRLGCNEQGFSPNMKGKKGPGKESRPSARGGCSATILFKLEKSGKWVVTKFVEEHNHPLV 145 5******************************************99999****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MVEGNDVELV RSGLNSDDLE EDDVFEAEDN GRTVEGGGVL KPSVGMEFKS EDDARRFYSD 60 YARRVGFVVC IMQRRRSDID GRTLACRLGC NEQGFSPNMK GKKGPGKESR PSARGGCSAT 120 ILFKLEKSGK WVVTKFVEEH NHPLVVTAHE HTNLLDKDKK IQELTRELQR QEELSAAYRE 180 RLVNLLDNIE NQAEHLSSKV LVVVQNMKKA EAETLTFSKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 3e-53 | FAR1 family protein |