PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIN06066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 114aa MW: 12681.6 Da PI: 8.5019 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 110.9 | 7.2e-35 | 19 | 100 | 19 | 99 |
NF-YC 19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 h+lPlarikki+k ++vkmis eaP+++skacelfi elt r+w+ + ++krrt++k d+a+av tdifdflv+ v +d PIN06066.1 19 HSLPLARIKKIMKNsSDEVKMISGEAPIVFSKACELFIEELTKRAWIMTLQAKRRTMQKEDVASAVIDTDIFDFLVNLVSHD 100 99***********72578***********************************************************99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 114 aa Download sequence |
MRQPGAYSKL VSGGKSGPHS LPLARIKKIM KNSSDEVKMI SGEAPIVFSK ACELFIEELT 60 KRAWIMTLQA KRRTMQKEDV ASAVIDTDIF DFLVNLVSHD SANTVRESDQ PQES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G56170.1 | 5e-34 | NF-YC family protein |