PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06047.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 308aa    MW: 34457.8 Da    PI: 9.4915
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1095.6e-34652051128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWka 85 
                 lp+G++F+P+d+e++ ++L++kv +++      ++++   i+   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W++
  PIN06047.1  65 LPAGVKFDPSDQEIL-QHLEAKVLSDTrklhplIDEFIPtIEGEnGICYTHPEKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHtdaeggETRWHK 161
                 799***********9.99****999996665443332333665557**********.566677888******************744446555778*** PP

         NAM  86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 tgk+++v + +g+ +g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  PIN06047.1 162 TGKTRPVSA-SGNIKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 205
                 ********9.9999**********66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MTWSYNDQEK ALQIISATKE KAVANSKADD HPHDQLIRKT TIICPSCGHT IKLHDQTGLQ  60
DLPGLPAGVK FDPSDQEILQ HLEAKVLSDT RKLHPLIDEF IPTIEGENGI CYTHPEKLPG  120
VSKDGQVRHF FHRPSKAYTT GTRKRRKVHT DAEGGETRWH KTGKTRPVSA SGNIKGYKKI  180
LVLYTNYGRQ RKPEKTNWVM HQYHLGDNEE EKDGELVVSK VFYQTQPRQC GSSSMKDSTS  240
RSSSKSSESA FMKNASFVEY YNPVPFISYN VGGQSVNRDS PPPLIPNMVV HGDGSSFIHL  300
PSTASKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-121NAC family protein