PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 171aa MW: 19570.1 Da PI: 10.0266 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.2 | 2.5e-17 | 22 | 77 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ ++t++q+++Le+ F n+ + +++ +LA +lg++ rqV +W+qN+Ra+ek+ PIN06045.1 22 KHKKRLTQDQVRILETNFSFNNRLEPDRKSRLALELGVPARQVAIWYQNKRAREKN 77 667889************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 101.6 | 6.8e-33 | 23 | 114 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl+++qv++LE++F+ +++Lep+rK++la eLg+ +rqva+W+qn+RAR k++ lE dy+aL+ +++++ ++n+rL+ ev++L++el++ PIN06045.1 23 HKKRLTQDQVRILETNFSFNNRLEPDRKSRLALELGVPARQVAIWYQNKRAREKNQSLEFDYKALQLRLENVLADNARLKGEVQRLKAELSK 114 79**************************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MHFNHATMDQ FPYPQSRKHL TKHKKRLTQD QVRILETNFS FNNRLEPDRK SRLALELGVP 60 ARQVAIWYQN KRAREKNQSL EFDYKALQLR LENVLADNAR LKGEVQRLKA ELSKIQGVLN 120 SFISPSSCDE VGNANLISKH DLEREFYASL IGGGGAFGGQ DGYDFFGRSV S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 2e-30 | HD-ZIP family protein |