PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05940.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 518aa MW: 57268.4 Da PI: 5.2891

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.3	1.2e-43	52	179	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 ppGfrF+Ptd el+ +yLkkk+++++l+l e i+ev++y+++P++L + k +++ wyfF++r+kky++gkr++ra+ +g+Wkatg +k+vl++ +++ PIN05940.1 52 PPGFRFEPTDLELIRDYLKKKINNEPLPL-EGIHEVNLYQYNPETLAeNYPKLGDNAWYFFTPREKKYKNGKRPSRAAGTGVWKATGANKPVLVEdRRT 149 9**************************.78**********8456667999********************************9986777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g k++Lvf++g ++g+kt+W+mhe+++ PIN05940.1 150 TIGWKNVLVFHEGGPQNGSKTNWIMHEFKV 179 8*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MNWTEYKSGP SQFQFKQATE RKNQLPANQS KETLSAMAAD LNPTALLALG YPPGFRFEPT 60 DLELIRDYLK KKINNEPLPL EGIHEVNLYQ YNPETLAENY PKLGDNAWYF FTPREKKYKN 120 GKRPSRAAGT GVWKATGANK PVLVEDRRTT IGWKNVLVFH EGGPQNGSKT NWIMHEFKVE 180 QPQPSRNQRD ADDMKLDDWV MCRIYKKDNR VGENNQRPAV ASALVDNNNP SESIGVDTPE 240 IANNDNPAQT SNFLEVDSNG NSNNNNNFEP MVINDNNATH VTTDNNINLG LIPNDTTSDI 300 DDVGSLLAYF GNDIPHESTL QSVLPSQNVP EISSSQINSG FDSLEHPPEQ PPNHLGPPFF 360 DIQARGIQPG DFQVQDYYNN PAQTGPSNVG SWGTQTSQNP PQARHSNVGS WGTQNSHNPP 420 QIRPSNLGSW GTQNSHNPPQ TQNSQNPPQA RHSNVGSLGT QNSHNPPQTG AFNFGFCGAQ 480 DFNNPRQIGP SNIGLWGTQD SSNPPQTEPS NVGREGSK

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MNWTEYKSGP SQFQFKQATE RKNQLPANQS KETLSAMAAD LNPTALLALG YPPGFRFEPT  60
DLELIRDYLK KKINNEPLPL EGIHEVNLYQ YNPETLAENY PKLGDNAWYF FTPREKKYKN  120
GKRPSRAAGT GVWKATGANK PVLVEDRRTT IGWKNVLVFH EGGPQNGSKT NWIMHEFKVE  180
QPQPSRNQRD ADDMKLDDWV MCRIYKKDNR VGENNQRPAV ASALVDNNNP SESIGVDTPE  240
IANNDNPAQT SNFLEVDSNG NSNNNNNFEP MVINDNNATH VTTDNNINLG LIPNDTTSDI  300
DDVGSLLAYF GNDIPHESTL QSVLPSQNVP EISSSQINSG FDSLEHPPEQ PPNHLGPPFF  360
DIQARGIQPG DFQVQDYYNN PAQTGPSNVG SWGTQTSQNP PQARHSNVGS WGTQNSHNPP  420
QIRPSNLGSW GTQNSHNPPQ TQNSQNPPQA RHSNVGSLGT QNSHNPPQTG AFNFGFCGAQ  480
DFNNPRQIGP SNIGLWGTQD SSNPPQTEPS NVGREGSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-50	NAC family protein