PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05938.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 579aa MW: 64667.2 Da PI: 4.4812

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.6	3.8e-43	16	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 ppG+rF Ptd el+ +yL kkv++++l++ + i +v++y+++P++L + k ++k+wyfF++r+kky++g+r+ ra+ +g+Wkatg dk++l + + PIN05938.1 16 PPGVRFAPTDLELIYYYLMKKVNNQPLPF-DEIYDVNLYQYNPETLAeNYPKLGDKDWYFFTPREKKYKNGSRPDRAAGNGFWKATGADKPILLRnhTI 113 9**************************.77**********845666799**********************************984344 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k+ Lvfy+g++pkg+ktdW+m e+++ PIN05938.1 114 TTIGWKRALVFYQGKHPKGNKTDWMMYEFKV 144 45*************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAAELNPATL LSRRCPPGVR FAPTDLELIY YYLMKKVNNQ PLPFDEIYDV NLYQYNPETL 60 AENYPKLGDK DWYFFTPREK KYKNGSRPDR AAGNGFWKAT GADKPILLRN HTITTIGWKR 120 ALVFYQGKHP KGNKTDWMMY EFKVDQPSRN KRGGDGMRLD DWVLCRIYKK VNRTRENNQQ 180 AAEASPLEDS TPVDQNNTPE FTEADDPEVD NNENLAQIED TVATLYTTEV GNNNNNHLGP 240 IVIHDDYATQ VAANGYDING VPLVTSISEQ ADWIVQDLAN FSIDPPSQNA LPQNVPVASS 300 HHMNFGFDGV TNPFPQPQNV PEPLFFDGEG WGIQKGYFQV QEGFLETQYA TNPPQTGHSL 360 FGPSTSNLSE SKIGIQGFDK DGVTNSFAQP QNVSEPSSFD MAGCGFQEGD FQVREGFDKD 420 GVTNSFAQPQ NVSEPSSFDI AGCGFQEGDF QAREGFNWKT PYPTDPPQMR SSHLGPSTSN 480 LSKPKIELED YDKDGVTNPF AQTQDVSASS VLDIEGCDIQ KGNFQIREGL WEILYPSDVP 540 PQSGLSHFGP SSVNLSESEI KVEDCEKHGH GMKRIHHDS

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAAELNPATL LSRRCPPGVR FAPTDLELIY YYLMKKVNNQ PLPFDEIYDV NLYQYNPETL  60
AENYPKLGDK DWYFFTPREK KYKNGSRPDR AAGNGFWKAT GADKPILLRN HTITTIGWKR  120
ALVFYQGKHP KGNKTDWMMY EFKVDQPSRN KRGGDGMRLD DWVLCRIYKK VNRTRENNQQ  180
AAEASPLEDS TPVDQNNTPE FTEADDPEVD NNENLAQIED TVATLYTTEV GNNNNNHLGP  240
IVIHDDYATQ VAANGYDING VPLVTSISEQ ADWIVQDLAN FSIDPPSQNA LPQNVPVASS  300
HHMNFGFDGV TNPFPQPQNV PEPLFFDGEG WGIQKGYFQV QEGFLETQYA TNPPQTGHSL  360
FGPSTSNLSE SKIGIQGFDK DGVTNSFAQP QNVSEPSSFD MAGCGFQEGD FQVREGFDKD  420
GVTNSFAQPQ NVSEPSSFDI AGCGFQEGDF QAREGFNWKT PYPTDPPQMR SSHLGPSTSN  480
LSKPKIELED YDKDGVTNPF AQTQDVSASS VLDIEGCDIQ KGNFQIREGL WEILYPSDVP  540
PQSGLSHFGP SSVNLSESEI KVEDCEKHGH GMKRIHHDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-51	NAC family protein