PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05698.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

E2F/DP

Protein Properties

Length: 371aa MW: 41557.9 Da PI: 8.537

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	75	7.9e-24	12	77	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l++++ +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg PIN05698.1 12 RKQKSLGLLCSNFLSLYNREGVETIGLDDAASRL---GV--ERRRIYDIVNVLESVGILARKAKNRYTWKG 77 79***************999********.....****************************98 PP
2	E2F_TDP	75.9	4.1e-24	147	228	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +++ ++++l+++ak L+ + +++k+RR+YDi+NVL++++ iek ++k+++rw g PIN05698.1 147 RKEKSLGLLTQNFVKLFLCTDMDMISLDDAAKLLLGDgkhtsmTTRTKVRRLYDIANVLSSMKFIEKthhpeTRKPAFRWLG 228 79***************************************999******************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MESGSKDIPY CRKQKSLGLL CSNFLSLYNR EGVETIGLDD AASRLGVERR RIYDIVNVLE 60 SVGILARKAK NRYTWKGFGA IPKALEDLKK EGLRETGPAA DTSCSEKVSD DDEDEMCSDM 120 NISSQNDKSD SSSVPKSAAP TKSGENRKEK SLGLLTQNFV KLFLCTDMDM ISLDDAAKLL 180 LGDGKHTSMT TRTKVRRLYD IANVLSSMKF IEKTHHPETR KPAFRWLGLN GKPDNGSSDS 240 MDLSESKKRV FGTDLTNTNT KRFKVDEQAA QVLKLNNPIR VKCESSENEV ERTRSAVKSY 300 QFGPFAPANV PKVGASHDEK EKQVVDWESL ASTYRPQYHN QALKELFSHY VEAWKSWYSE 360 VAGKSPIQLM S

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MESGSKDIPY CRKQKSLGLL CSNFLSLYNR EGVETIGLDD AASRLGVERR RIYDIVNVLE  60
SVGILARKAK NRYTWKGFGA IPKALEDLKK EGLRETGPAA DTSCSEKVSD DDEDEMCSDM  120
NISSQNDKSD SSSVPKSAAP TKSGENRKEK SLGLLTQNFV KLFLCTDMDM ISLDDAAKLL  180
LGDGKHTSMT TRTKVRRLYD IANVLSSMKF IEKTHHPETR KPAFRWLGLN GKPDNGSSDS  240
MDLSESKKRV FGTDLTNTNT KRFKVDEQAA QVLKLNNPIR VKCESSENEV ERTRSAVKSY  300
QFGPFAPANV PKVGASHDEK EKQVVDWESL ASTYRPQYHN QALKELFSHY VEAWKSWYSE  360
VAGKSPIQLM S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-114	E2F/DP family protein